STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_07539Splicing factor PWI domain-containing protein. (359 aa)    
Predicted Functional Partners:
AMSG_08314
RNA-binding protein cabeza.
    
 0.988
AMSG_01562
RanBP2-type domain-containing protein.
    
 0.988
AMSG_10940
Allatostatin protein.
   
 
  0.986
AMSG_11428
Hydroxylamine reductase.
    
 0.881
AMSG_12366
MIF4G domain-containing protein.
    
 
 0.877
AMSG_00861
PRP38 pre-mRNA processing factor 38 domain containing A.
   
 0.807
AMSG_01733
Serine-arginine protein 55.
   
 0.803
AMSG_09678
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.774
AMSG_05025
RRM domain-containing protein.
   
 0.773
AMSG_11388
Pre-mRNA-processing factor 17.
    
 0.764
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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