STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_07155Cox15 protein. (389 aa)    
Predicted Functional Partners:
AMSG_12407
Uncharacterized protein.
  
 0.984
AMSG_01879
Cytochrome c oxidase assembly protein COX11.
  
 0.950
AMSG_07731
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
  
 
 0.930
AMSG_05886
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
 
  
 
 0.895
AMSG_03890
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.892
AMSG_06432
Ferrochelatase; Belongs to the ferrochelatase family.
  
 
 0.880
AMSG_01305
Ferredoxin.
 
 
  
 0.879
AMSG_10056
Uncharacterized protein.
     
 0.870
AMSG_03207
Cytochrome c oxidase polypeptide vib.
     
 0.868
AMSG_01005
Classical-complement-pathway C3/C5 convertase.
  
 0.853
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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