STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_08254Pregnancy-associated glycoprotein 6; Belongs to the peptidase A1 family. (451 aa)    
Predicted Functional Partners:
AMSG_04606
Uncharacterized protein.
    
  0.665
AMSG_08920
Reticulon-like protein.
    
  0.665
AMSG_00056
Cruzipain; Belongs to the peptidase C1 family.
   
 0.632
AMSG_01293
Cruzipain; Belongs to the peptidase C1 family.
   
 0.632
AMSG_10047
Cysteine proteinase 1; Belongs to the peptidase C1 family.
   
 0.632
AMSG_00763
Saposin A.
   
 0.591
AMSG_03776
SERPIN domain-containing protein; Belongs to the serpin family.
   
 0.571
AMSG_08088
Serpin-5A; Belongs to the serpin family.
   
 0.571
AMSG_08237
Cysteine protease CP19; Belongs to the peptidase C1 family.
   
 0.561
AMSG_12224
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 0.561
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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