STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_08248Proliferation associated protein. (401 aa)    
Predicted Functional Partners:
AMSG_03569
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.999
AMSG_04074
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.998
AMSG_06187
Ribosomal protein L35.
  
 
 0.998
AMSG_07514
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.997
AMSG_05004
Ribos_L4_asso_C domain-containing protein.
  
 
 0.995
AMSG_05005
60S ribosomal protein L8.
  
 
 0.992
AMSG_04816
Uncharacterized protein.
   
 
 0.989
AMSG_04197
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.988
AMSG_00191
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.987
AMSG_01453
60S ribosomal protein L10-B.
  
 
 0.987
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.