STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_08343Uncharacterized protein. (449 aa)    
Predicted Functional Partners:
AMSG_04379
Uncharacterized protein.
   
 0.674
AMSG_08522
CA domain-containing protein.
   
 0.674
AMSG_01366
Pex14_N domain-containing protein.
   
 0.674
AMSG_04710
CK1/CK1 protein kinase; Belongs to the protein kinase superfamily.
    
  0.592
AMSG_05528
CK1/CK1/CK1-D protein kinase.
    
  0.592
AMSG_07362
CK1/CK1/CK1-D protein kinase; Belongs to the protein kinase superfamily.
    
  0.592
AMSG_11205
CK1/TTBK protein kinase.
    
  0.592
AMSG_04788
Uncharacterized protein.
     
 0.586
AMSG_04573
Nicastrin.
   
 
  0.574
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.