STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_08121RNA methyltransferase TrmH. (186 aa)    
Predicted Functional Partners:
AMSG_05245
PseudoU_synth_2 domain-containing protein.
  
  
 0.655
AMSG_03361
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase.
     
 0.583
AMSG_07977
Methylase MraW.
     
 0.487
AMSG_00167
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
     
 0.475
AMSG_01206
Delta-1-pyrroline-5-carboxylate synthetase.
       0.456
AMSG_00288
tRNA (Guanine-N(7)-)-methyltransferase.
  
  
 0.453
AMSG_05335
tRNA (guanine(46)-N(7))-methyltransferase.
  
  
 0.453
AMSG_03137
3-deoxy-manno-octulosonate cytidylyltransferase.
     
 0.441
AMSG_01222
Glycerol-3-phosphate dehydrogenase [NAD(+)].
     
 0.428
AMSG_03204
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
  
    0.426
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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