STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_08328RING-box protein 1A. (71 aa)    
Predicted Functional Partners:
AMSG_00283
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.995
AMSG_00072
UBX domain-containing protein.
    
 0.995
AMSG_01465
DNA damage-binding protein 1.
    
 0.992
AMSG_09528
Uncharacterized protein.
    
 0.988
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
  0.987
AMSG_05411
Cullin 4; Belongs to the cullin family.
    
 0.972
AMSG_04072
Ubiquitin carrier protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.971
AMSG_04718
Ubiquitin carrier protein.
   
 0.969
AMSG_00122
NEDD8 protein.
   
 0.958
AMSG_03987
Cell division cycle protein cdt2.
    
 0.955
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.