Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMSG_01118 | AMSG_02526 | A0A0L0DJK8 | A0A0L0D560 | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | Endonuclease IV. | 0.885 |
AMSG_01118 | AMSG_03204 | A0A0L0DJK8 | A0A0L0D3U4 | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family. | 0.510 |
AMSG_01118 | AMSG_07825 | A0A0L0DJK8 | A0A0L0DHB6 | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.785 |
AMSG_01118 | AMSG_08120 | A0A0L0DJK8 | A0A0L0DMD3 | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | Deoxyuridine 5'-triphosphate nucleotidohydrolase. | 0.436 |
AMSG_01118 | AMSG_12160 | A0A0L0DJK8 | A0A0L0DJW0 | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.655 |
AMSG_01118 | NTH1 | A0A0L0DJK8 | A0A0L0D469 | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. | 0.799 |
AMSG_01465 | AMSG_03886 | A0A0L0DRJ0 | A0A0L0D6G3 | DNA damage-binding protein 1. | Uncharacterized protein. | 0.992 |
AMSG_01465 | AMSG_07825 | A0A0L0DRJ0 | A0A0L0DHB6 | DNA damage-binding protein 1. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.631 |
AMSG_01465 | AMSG_12160 | A0A0L0DRJ0 | A0A0L0DJW0 | DNA damage-binding protein 1. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.637 |
AMSG_01834 | AMSG_02526 | A0A0L0DTK6 | A0A0L0D560 | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | Endonuclease IV. | 0.885 |
AMSG_01834 | AMSG_03204 | A0A0L0DTK6 | A0A0L0D3U4 | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family. | 0.510 |
AMSG_01834 | AMSG_07825 | A0A0L0DTK6 | A0A0L0DHB6 | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.785 |
AMSG_01834 | AMSG_08120 | A0A0L0DTK6 | A0A0L0DMD3 | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | Deoxyuridine 5'-triphosphate nucleotidohydrolase. | 0.436 |
AMSG_01834 | AMSG_12160 | A0A0L0DTK6 | A0A0L0DJW0 | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. | 0.655 |
AMSG_01834 | NTH1 | A0A0L0DTK6 | A0A0L0D469 | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines; Belongs to the Nth/MutY family. | 0.953 |
AMSG_02526 | AMSG_01118 | A0A0L0D560 | A0A0L0DJK8 | Endonuclease IV. | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | 0.885 |
AMSG_02526 | AMSG_01834 | A0A0L0D560 | A0A0L0DTK6 | Endonuclease IV. | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | 0.885 |
AMSG_02526 | AMSG_03204 | A0A0L0D560 | A0A0L0D3U4 | Endonuclease IV. | Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family. | 0.593 |
AMSG_02526 | AMSG_08120 | A0A0L0D560 | A0A0L0DMD3 | Endonuclease IV. | Deoxyuridine 5'-triphosphate nucleotidohydrolase. | 0.576 |
AMSG_02526 | AMSG_12001 | A0A0L0D560 | A0A0L0DHG6 | Endonuclease IV. | Uncharacterized protein. | 0.885 |
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