STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_08048TTK protein kinase. (977 aa)    
Predicted Functional Partners:
AMSG_00602
Serine/threonine-protein phosphatase.
    
 0.700
AMSG_10657
Serine/threonine-protein phosphatase.
    
 0.700
AMSG_09120
AGC/PKA protein kinase.
   
0.554
AMSG_08067
Ubiquitin/ribosomal protein S27 fusion protein.
   
  0.521
AMSG_02219
Uncharacterized protein.
    
  0.518
AMSG_04663
BZIP domain-containing protein.
    
  0.507
AMSG_01391
MAD1L1 protein.
    
 0.500
AMSG_05143
Beclin-1.
    
 0.491
AMSG_11593
Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 
 0.480
AMSG_01071
Centromere protein P.
    
  0.478
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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