STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_09196Uncharacterized protein. (423 aa)    
Predicted Functional Partners:
AMSG_00283
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 
 0.808
AMSG_02753
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.631
AMSG_05943
Uncharacterized protein.
  
  
 0.631
AMSG_01513
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.631
AMSG_05314
ATP-dependent Clp protease proteolytic subunit.
   
 
 0.477
AMSG_05005
60S ribosomal protein L8.
   
  
 0.465
AMSG_04556
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
   
  
 0.441
AMSG_03139
SER_THR_PHOSPHATASE domain-containing protein.
  
  
 0.439
AMSG_03194
Serine/threonine-protein phosphatase.
  
  
 0.439
AMSG_03762
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
  
  
 0.439
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.