STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_09006Carboxypeptidase B. (418 aa)    
Predicted Functional Partners:
AMSG_04294
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 0.559
AMSG_07197
Serine protease 27; Belongs to the peptidase S1 family.
   
 0.559
AMSG_07364
Uncharacterized protein.
   
 0.559
AMSG_07845
Trypsin; Belongs to the peptidase S1 family.
   
 0.559
AMSG_08531
Trypsin domain lipoprotein; Belongs to the peptidase S1 family.
   
 0.559
AMSG_09567
6 carbohydrate binding protein.
   
 0.559
AMSG_02198
Uncharacterized protein.
    
 0.530
AMSG_07301
GTP-binding protein Era.
  
 
  0.465
AMSG_09404
SOL1 protein.
  
  
 0.412
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.