AMSG_09070 protein (Thecamonas trahens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AMSG_09070

AB hydrolase-1 domain-containing protein. (2166 aa)

Predicted Functional Partners:

AMSG_01206

0.891

AMSG_01228

0.831

AMSG_05953

0.817

AMSG_03128

0.753

AMSG_01073

0.742

AMSG_03204

0.741

AMSG_07993

0.716

AMSG_02418

0.713

AMSG_00534

0.709

AMSG_04361

0.707

Your Current Organism:

Thecamonas trahens

NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMSG_00534	AMSG_01073	A0A0L0D8P9	A0A0L0DIN0	Glucose-6-phosphate isomerase; Belongs to the GPI family.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.557
AMSG_00534	AMSG_01206	A0A0L0D8P9	A0A0L0DPY4	Glucose-6-phosphate isomerase; Belongs to the GPI family.	Delta-1-pyrroline-5-carboxylate synthetase.	0.753
AMSG_00534	AMSG_02418	A0A0L0D8P9	A0A0L0DY21	Glucose-6-phosphate isomerase; Belongs to the GPI family.	Triosephosphate isomerase.	0.993
AMSG_00534	AMSG_03204	A0A0L0D8P9	A0A0L0D3U4	Glucose-6-phosphate isomerase; Belongs to the GPI family.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.833
AMSG_00534	AMSG_04361	A0A0L0D8P9	A0A0L0D7U2	Glucose-6-phosphate isomerase; Belongs to the GPI family.	Anhydro-N-acetylmuramic acid kinase.	0.949
AMSG_00534	AMSG_05953	A0A0L0D8P9	A0A0L0DBT3	Glucose-6-phosphate isomerase; Belongs to the GPI family.	Prolyl-tRNA synthetase.	0.537
AMSG_00534	AMSG_07993	A0A0L0D8P9	A0A0L0DHP5	Glucose-6-phosphate isomerase; Belongs to the GPI family.	Iron-containing alcohol dehydrogenase.	0.548
AMSG_00534	AMSG_09070	A0A0L0D8P9	A0A0L0DLI5	Glucose-6-phosphate isomerase; Belongs to the GPI family.	AB hydrolase-1 domain-containing protein.	0.709
AMSG_01073	AMSG_00534	A0A0L0DIN0	A0A0L0D8P9	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.557
AMSG_01073	AMSG_01206	A0A0L0DIN0	A0A0L0DPY4	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Delta-1-pyrroline-5-carboxylate synthetase.	0.769
AMSG_01073	AMSG_02418	A0A0L0DIN0	A0A0L0DY21	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Triosephosphate isomerase.	0.561
AMSG_01073	AMSG_03128	A0A0L0DIN0	A0A0L0D3E6	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Uncharacterized protein.	0.503
AMSG_01073	AMSG_03204	A0A0L0DIN0	A0A0L0D3U4	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.751
AMSG_01073	AMSG_07993	A0A0L0DIN0	A0A0L0DHP5	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Iron-containing alcohol dehydrogenase.	0.482
AMSG_01073	AMSG_09070	A0A0L0DIN0	A0A0L0DLI5	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	AB hydrolase-1 domain-containing protein.	0.742
AMSG_01206	AMSG_00534	A0A0L0DPY4	A0A0L0D8P9	Delta-1-pyrroline-5-carboxylate synthetase.	Glucose-6-phosphate isomerase; Belongs to the GPI family.	0.753
AMSG_01206	AMSG_01073	A0A0L0DPY4	A0A0L0DIN0	Delta-1-pyrroline-5-carboxylate synthetase.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.769
AMSG_01206	AMSG_02418	A0A0L0DPY4	A0A0L0DY21	Delta-1-pyrroline-5-carboxylate synthetase.	Triosephosphate isomerase.	0.592
AMSG_01206	AMSG_03128	A0A0L0DPY4	A0A0L0D3E6	Delta-1-pyrroline-5-carboxylate synthetase.	Uncharacterized protein.	0.682
AMSG_01206	AMSG_03204	A0A0L0DPY4	A0A0L0D3U4	Delta-1-pyrroline-5-carboxylate synthetase.	Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.	0.863