STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_09859Armadillo repeat-containing protein 4. (1098 aa)    
Predicted Functional Partners:
AMSG_03506
WD repeat-containing protein 90.
    
   0.613
AMSG_11593
Uncharacterized protein; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
   0.578
AMSG_00444
Park2 co-regulated.
  
 
 0.551
AMSG_08238
Inner dynein arm light chain, axonemal.
  
 
 0.549
AMSG_01608
Uncharacterized protein.
   
 
 0.537
AMSG_08963
ANK_REP_REGION domain-containing protein.
    
 
 0.514
AMSG_00472
Tubulin; Belongs to the tubulin family.
    
   0.495
AMSG_07955
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
   0.495
AMSG_01134
Uncharacterized protein.
    
   0.495
AMSG_07753
Tetratricopeptide repeat protein 25.
  
 
 
 0.478
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.