STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_01431Acetyltransferase. (223 aa)    
Predicted Functional Partners:
AMSG_05246
Cystathionine beta-synthase.
   
 0.784
AMSG_06026
Acyl-(Acyl-carrier-protein)-UDP-N-acetylglucosa mineO-acyltransferase.
    
 0.726
AMSG_00231
Oxidoreductase domain-containing protein.
  
 
 0.723
AMSG_01309
Oxidoreductase domain-containing protein.
  
 
 0.723
AMSG_12047
PALP domain-containing protein.
   
 0.720
AMSG_10946
Cysteine synthase.
   
 0.720
AMSG_01159
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase.
    
 0.717
AMSG_12086
PALP domain-containing protein.
  
 
 0.710
AMSG_08024
Homoserine dehydrogenase.
     
 0.700
AMSG_08910
ATP synthase subunit gamma.
    
  0.690
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.