STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_09258MYB family transcription factor. (442 aa)    
Predicted Functional Partners:
AMSG_00164
DIRP domain-containing protein.
    
 0.909
AMSG_03628
NURF complex component.
   
 0.860
AMSG_04018
G2/mitotic-specific cyclin-A; Belongs to the cyclin family.
  
 0.780
AMSG_03791
Cell division control protein 2; Belongs to the protein kinase superfamily.
   
 0.700
AMSG_06890
Serine/threonine protein kinase.
   
 0.700
AMSG_11638
ANK_REP_REGION domain-containing protein; Belongs to the cyclin family.
   
 0.689
AMSG_01071
Centromere protein P.
   
 
 0.640
AMSG_02631
Uncharacterized protein.
   
 0.632
AMSG_06515
UDP-galactopyranose mutase.
   
 0.632
AMSG_01249
Coiled-coil flagellar protein.
   
 0.632
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.