STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_10412Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (578 aa)    
Predicted Functional Partners:
AMSG_05376
Electron transfer flavoprotein beta subunit.
 
 0.998
AMSG_09092
Electron transfer flavoprotein.
 
 0.998
AMSG_00410
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.783
AMSG_01305
Ferredoxin.
 
 
  
 0.671
AMSG_01052
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 
 0.664
AMSG_12094
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.588
AMSG_09116
Hydroxymethylglutaryl-CoA lyase.
  
  
 0.552
AMSG_00317
Isovaleryl-CoA dehydrogenase.
  
 
 0.542
AMSG_04434
Acyl-Coenzyme A dehydrogenase.
  
 
 0.542
AMSG_07728
Hydroxyacyl-Coenzyme A dehydrogenase.
  
  
 0.542
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.