STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_10687Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (661 aa)    
Predicted Functional Partners:
AMSG_01103
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.984
AMSG_03004
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.979
AMSG_00611
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.976
AMSG_05215
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 
 0.975
AMSG_01742
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
    
 
 0.974
AMSG_01669
50S ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.972
AMSG_04197
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.970
AMSG_08554
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.970
AMSG_03123
30S ribosomal protein S9.
  
 
 0.969
AMSG_03502
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.969
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.