STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_10846Polyketide synthase hetM. (1343 aa)    
Predicted Functional Partners:
AMSG_10349
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.946
AMSG_00580
Histidinol dehydrogenase; Belongs to the HisA/HisF family.
   
  
 0.922
AMSG_05774
Uncharacterized protein.
  
  
 0.769
AMSG_03768
Fatty acid synthase.
 
 0.759
AMSG_01295
Uncharacterized protein.
  
 0.759
AMSG_03545
4'-phosphopantetheinyl transferase.
  
 0.734
AMSG_05173
Holo-(Acyl-carrier-protein) synthase.
  
 0.713
AMSG_05771
AMP-dependent synthetase and ligase.
  
 0.713
AMSG_06891
AMP-dependent synthetase and ligase.
  
0.713
AMSG_12142
Uncharacterized protein.
 
0.713
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.