AMSG_12405 protein (Thecamonas trahens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

AMSG_12405

Uncharacterized protein. (804 aa)

Predicted Functional Partners:

AMSG_03173

0.950

AMSG_03980

0.943

AMSG_11068

0.943

AMSG_02198

0.930

AMSG_09360

0.796

AMSG_05911

0.751

AMSG_07316

0.751

AMSG_12164

0.751

AMSG_10152

0.751

AMSG_10153

0.751

Your Current Organism:

Thecamonas trahens

NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMSG_02198	AMSG_03173	A0A0L0DV59	A0A0L0D358	Uncharacterized protein.	RING-type domain-containing protein.	0.899
AMSG_02198	AMSG_03980	A0A0L0DV59	A0A0L0D8Y4	Uncharacterized protein.	RING-type domain-containing protein.	0.849
AMSG_02198	AMSG_05911	A0A0L0DV59	A0A0L0DDG2	Uncharacterized protein.	Histone H3.	0.454
AMSG_02198	AMSG_07316	A0A0L0DV59	A0A0L0DGR0	Uncharacterized protein.	Histone.	0.454
AMSG_02198	AMSG_09360	A0A0L0DV59	A0A0L0DL68	Uncharacterized protein.	Uncharacterized protein.	0.534
AMSG_02198	AMSG_10152	A0A0L0DV59	A0A0L0DQ73	Uncharacterized protein.	Histone H3.	0.454
AMSG_02198	AMSG_10153	A0A0L0DV59	A0A0L0DQX7	Uncharacterized protein.	Histone.	0.454
AMSG_02198	AMSG_11068	A0A0L0DV59	A0A0L0DT54	Uncharacterized protein.	RING-type domain-containing protein.	0.849
AMSG_02198	AMSG_12164	A0A0L0DV59	A0A0L0DK52	Uncharacterized protein.	Histone domain-containing protein.	0.454
AMSG_02198	AMSG_12405	A0A0L0DV59	A0A0L0DSU6	Uncharacterized protein.	Uncharacterized protein.	0.930
AMSG_03173	AMSG_02198	A0A0L0D358	A0A0L0DV59	RING-type domain-containing protein.	Uncharacterized protein.	0.899
AMSG_03173	AMSG_03980	A0A0L0D358	A0A0L0D8Y4	RING-type domain-containing protein.	RING-type domain-containing protein.	0.963
AMSG_03173	AMSG_05911	A0A0L0D358	A0A0L0DDG2	RING-type domain-containing protein.	Histone H3.	0.550
AMSG_03173	AMSG_07316	A0A0L0D358	A0A0L0DGR0	RING-type domain-containing protein.	Histone.	0.550
AMSG_03173	AMSG_09360	A0A0L0D358	A0A0L0DL68	RING-type domain-containing protein.	Uncharacterized protein.	0.780
AMSG_03173	AMSG_10152	A0A0L0D358	A0A0L0DQ73	RING-type domain-containing protein.	Histone H3.	0.550
AMSG_03173	AMSG_10153	A0A0L0D358	A0A0L0DQX7	RING-type domain-containing protein.	Histone.	0.550
AMSG_03173	AMSG_11068	A0A0L0D358	A0A0L0DT54	RING-type domain-containing protein.	RING-type domain-containing protein.	0.951
AMSG_03173	AMSG_12164	A0A0L0D358	A0A0L0DK52	RING-type domain-containing protein.	Histone domain-containing protein.	0.550
AMSG_03173	AMSG_12405	A0A0L0D358	A0A0L0DSU6	RING-type domain-containing protein.	Uncharacterized protein.	0.950