STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_11026Uncharacterized protein. (1059 aa)    
Predicted Functional Partners:
AMSG_00041
3'-5' exonuclease.
   
 0.991
AMSG_00980
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.991
AMSG_00045
Cell cycle checkpoint control protein RAD9A.
    
 0.908
AMSG_02997
Uncharacterized protein.
   
 0.906
AMSG_01661
Atypical/PIKK/ATR protein kinase; Belongs to the PI3/PI4-kinase family.
    
 0.871
AMSG_06715
Cell division control protein 45.
   
 
 0.864
AMSG_06299
Uncharacterized protein.
    
 
 0.852
AMSG_00775
DNA helicase; Belongs to the MCM family.
   
 
 0.842
AMSG_10128
DNA helicase; Belongs to the MCM family.
   
 
 0.812
AMSG_03910
Uncharacterized protein.
   
 
 0.801
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.