STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_01874NAD dependent epimerase/dehydratase. (359 aa)    
Predicted Functional Partners:
AMSG_05824
UDP-glucose 6-dehydrogenase.
 
 
 0.940
AMSG_01055
NRS/ER protein.
 
      0.899
AMSG_05622
Dolichyl-phosphate beta-glucosyltransferase.
  
 
 0.798
AMSG_04925
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
0.779
AMSG_04999
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
0.779
AMSG_07037
Glycosyl transferase.
  
 
 0.742
AMSG_03338
GHMP kinase.
  
 
 0.731
AMSG_12091
NTP_transferase domain-containing protein.
  
 
 0.731
AMSG_01035
Mannose-1-phosphate guanyltransferase beta.
  
 
 0.731
AMSG_04243
UDP-glucose pyrophosphorylase 2.
  
 
 0.722
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.