STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_01910Mitotic checkpoint protein BUB3. (332 aa)    
Predicted Functional Partners:
AMSG_01312
BUB protein kinase.
   
 0.999
AMSG_09792
Mitotic spindle assembly checkpoint protein MAD2A.
   
 0.997
AMSG_06230
TPR_REGION domain-containing protein.
    
 0.993
AMSG_08314
RNA-binding protein cabeza.
   
 
 0.988
AMSG_01562
RanBP2-type domain-containing protein.
   
 
 0.988
AMSG_05595
WD_REPEATS_REGION domain-containing protein.
    
 0.983
AMSG_05490
Cell cycle switch protein CCS52a.
   
 0.960
AMSG_05545
Cdc20.
   
 0.960
AMSG_11102
Cell division cycle protein 23.
   
 0.942
AMSG_03469
ANAPC5 domain-containing protein.
    
 0.936
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.