STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_10749DNA repair and recombination protein radA. (356 aa)    
Predicted Functional Partners:
AMSG_01660
Uncharacterized protein.
   
 0.963
AMSG_05189
Breast cancer type 2 susceptibility protein.
   
 0.874
AMSG_00187
Rad51 domain-containing protein.
   
 0.869
AMSG_00041
3'-5' exonuclease.
  
 0.856
AMSG_00980
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.856
AMSG_10415
Replication protein A subunit.
  
 0.845
AMSG_00757
RAD51/dmc1 protein; Belongs to the RecA family.
  
0.818
AMSG_07825
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.813
AMSG_02997
Uncharacterized protein.
   
 0.812
AMSG_02375
Rad51 DNA recombinase 3.
  
0.812
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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