STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_02141Na-Ca exchanger/integrin-beta4. (519 aa)    
Predicted Functional Partners:
AMSG_00151
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.698
AMSG_08313
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
   
 0.587
AMSG_09035
Splicing factor 3B subunit 1.
   
 
  0.583
AMSG_09067
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
   
 0.582
AMSG_02897
V-type proton ATPase catalytic subunit A.
   
 0.573
AMSG_04380
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
  0.572
AMSG_09233
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
  0.572
AMSG_01637
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
  0.572
AMSG_10294
ATP synthase.
   
 0.559
AMSG_09120
AGC/PKA protein kinase.
   
 0.554
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
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