STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMSG_02134HEAT repeat containing protein. (748 aa)    
Predicted Functional Partners:
AMSG_06309
SAC domain-containing protein 9.
    
 0.942
AMSG_05343
SacI domain-containing protein.
    
 0.942
AMSG_02721
Phosphatidylinositol-3-phosphate/phosphatidylinos itol 5-kinase.
  
 
 0.896
AMSG_06541
Uncharacterized protein.
  
 
 0.895
AMSG_01123
Uncharacterized protein.
    
 0.874
AMSG_03853
WD repeat domain phosphoinositide-interacting protein 2.
    
 
 0.693
AMSG_01413
Uncharacterized protein.
 
  
   0.595
AMSG_10685
Tyrosyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.502
AMSG_06447
MRS-1 protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.482
AMSG_10949
Uncharacterized protein.
      
 0.446
Your Current Organism:
Thecamonas trahens
NCBI taxonomy Id: 461836
Other names: Amastigomonas sp. ATCC 50062, T. trahens ATCC 50062, Thecamonas trahens ATCC 50062
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.