STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK17496.1Hypothetical protein. (265 aa)    
Predicted Functional Partners:
SEK53292.1
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
 
    0.901
SEK66973.1
Hypothetical protein.
  
     0.771
SEK17494.1
Rhamnosyltransferase.
  
    0.733
SEK17492.1
Glycosyl transferase family 2.
  
    0.695
SEK17497.1
ADP-ribosyltransferase exoenzyme.
       0.682
SEK17499.1
Acetyltransferase (GNAT) domain-containing protein.
       0.682
SEK17490.1
Protein of unknown function.
       0.659
SEK45932.1
Mannose-1-phosphate guanylyltransferase.
    
  0.618
SEK17488.1
Hypothetical protein.
       0.492
SEK45954.1
Mannose-6-phosphate isomerase.
  
 
 0.431
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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