STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK17529.1Simple sugar transport system permease protein. (314 aa)    
Predicted Functional Partners:
SEK17524.1
Simple sugar transport system ATP-binding protein.
 
 0.999
SEK17526.1
Simple sugar transport system permease protein.
 
0.999
SEK17522.1
Basic membrane protein A.
 
 
 0.996
SEK17531.1
HDIG domain-containing protein.
       0.768
SEK55292.1
Ribose transport system ATP-binding protein.
  
  0.720
SEK51707.1
Putative multiple sugar transport system ATP-binding protein.
  
  0.663
SEK31865.1
Putative multiple sugar transport system ATP-binding protein.
  
  0.614
SEK99622.1
Simple sugar transport system ATP-binding protein.
  
  0.613
SEK18319.1
Putative multiple sugar transport system ATP-binding protein.
  
  0.552
SEK17519.1
Cytidine deaminase.
  
  
 0.536
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.