STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK18411.1Protein of unknown function. (92 aa)    
Predicted Functional Partners:
SEK95729.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.956
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.898
SEK18425.1
Flavodoxin, short chain.
       0.788
SEK34350.1
Aldehyde dehydrogenase (NAD+).
  
 
 0.760
SEK19830.1
NADPH-dependent glutamate synthase beta chain.
     
 0.671
SEK97332.1
Phosphoribosylformylglycinamidine synthase.
  
  
 0.644
gap
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.619
SEK55697.1
Lactaldehyde reductase.
   
  
 0.586
SEK64976.1
NAD+ synthase (glutamine-hydrolysing).
    
 0.481
cadA
Cd2+/Zn2+-exporting ATPase.
     
 0.471
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.