STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK22058.1LPXTG-motif cell wall anchor domain-containing protein. (1265 aa)    
Predicted Functional Partners:
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
    0.971
SEK22079.1
Hypothetical protein.
    
 0.816
SEK22147.1
Hypothetical protein.
    
 0.763
SEK22104.1
Hypothetical protein.
       0.638
SEK76348.1
Hypothetical protein.
  
 
 0.602
SEK84983.1
Hypothetical protein.
  
 
 0.602
SEK23125.1
Sortase B.
   
  0.591
SEK22130.1
Hypothetical protein.
       0.572
SEK22175.1
Hypothetical protein.
       0.546
SEK18242.1
Hypothetical protein.
    
 0.499
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.