STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK22079.1Hypothetical protein. (345 aa)    
Predicted Functional Partners:
SEK22058.1
LPXTG-motif cell wall anchor domain-containing protein.
    
 0.816
SEK62274.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
 
 0.797
SEK53925.1
Endoglucanase.
   
 0.757
SEK22104.1
Hypothetical protein.
       0.713
SEK22130.1
Hypothetical protein.
       0.694
SEK22147.1
Hypothetical protein.
       0.665
SEK22175.1
Hypothetical protein.
       0.661
SEK33045.1
Aryl-phospho-beta-D-glucosidase BglC, GH1 family.
    
  0.607
SEK87316.1
Carboxyl-terminal processing protease.
  
   0.602
SEK42923.1
Hypothetical protein.
  
 0.598
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.