STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK31614.1Hypothetical protein. (284 aa)    
Predicted Functional Partners:
SEK88961.1
Hypothetical protein.
  
  
  0.788
SEK42532.1
Flagellar hook-associated protein 3 FlgL.
  
 
   0.787
SEK54022.1
Cell division ATPase FtsA.
 
     0.782
flgM
Anti-sigma-28 factor, FlgM family.
  
     0.774
SEK59601.1
Flagellar FliJ protein.
  
     0.774
SEK30546.1
Hypothetical protein.
  
     0.772
SEK76569.1
Hypothetical protein.
 
     0.772
SEK59660.1
Flagellar hook-length control protein FliK.
  
     0.769
SEK60167.1
c-di-GMP-binding flagellar brake protein YcgR, contains PilZNR and PilZ domains.
  
     0.769
SEK59511.1
Flagellar M-ring protein FliF.
  
     0.766
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.