STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK52733.1Threonine dehydrogenase. (420 aa)    
Predicted Functional Partners:
SEK95729.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.974
SEK83464.1
PTS system, fructose-specific IIC component.
  
 
 0.925
SEK52679.1
Mannitol operon transcriptional antiterminator.
 
 
 0.922
SEK52648.1
PTS system, mannitol-specific IIC component.
 
   
 0.910
SEK52706.1
PTS system, mannitol-specific IIA component.
 
   
 0.853
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.800
SEK96139.1
NADPH-dependent glutamate synthase beta chain.
    
 0.786
SEK35869.1
PTS system, D-glucosamine-specific IIC component.
  
 
 0.775
SEK56026.1
PTS system, beta-glucosides-specific IIC component.
  
 
 0.775
SEK52764.1
Phosphocarrier protein.
     
 0.769
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.