STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilvB-2Acetolactate synthase, large subunit. (563 aa)    
Predicted Functional Partners:
SEK52891.1
Acetolactate synthase, small subunit.
 
 0.999
SEK32028.1
Acetolactate synthase, small subunit.
 0.997
SEK31996.1
Ketol-acid reductoisomerase.
 
 
 0.994
SEK95729.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.976
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
 0.973
leuB
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 0.965
SEK61198.1
Threonine dehydratase.
  
 0.918
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.910
SEK29692.1
Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.
   
 
 0.848
SEK53067.1
butyryl-CoA dehydrogenase.
  
 0.846
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.