STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK54915.1Beta-fructofuranosidase. (508 aa)    
Predicted Functional Partners:
SEK56026.1
PTS system, beta-glucosides-specific IIC component.
 
 0.988
SEK35869.1
PTS system, D-glucosamine-specific IIC component.
  
 
 0.983
SEK83464.1
PTS system, fructose-specific IIC component.
   
 
 0.966
SEK51792.1
Fructokinase.
 
 0.949
SEK91767.1
Sucrose phosphorylase.
  
 
 0.910
SEK40995.1
PTS system, N-acetylglucosamine-specific IIC component.
  
 
 0.867
SEK54884.1
Putative aldouronate transport system substrate-binding protein.
 
     0.851
SEK54717.1
Beta-fructofuranosidase.
 
  
 
0.827
SEK45954.1
Mannose-6-phosphate isomerase.
  
 
 0.823
SEK87185.1
Alpha-glucosidase.
     
 0.766
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.