STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galEUDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (338 aa)    
Predicted Functional Partners:
galT
UDPglucose--hexose-1-phosphate uridylyltransferase.
  
 
 0.998
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
 0.989
glf
UDP-galactopyranose mutase.
    
 0.962
SEK77759.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.961
SEK48371.1
UDPglucose 6-dehydrogenase.
  
 
 0.935
SEK47371.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
 0.913
SEK21632.1
D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase.
    
 0.894
SEK44362.1
dTDP-6-deoxy-L-talose 4-dehydrogenase (NAD+).
  
 0.811
SEK43641.1
NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family.
  
0.809
SEK48343.1
Glycosyltransferase, GT2 family.
    
 0.767
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.