STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK67822.1Glutathione peroxidase; Belongs to the glutathione peroxidase family. (180 aa)    
Predicted Functional Partners:
SEK53418.1
Ribonucleoside-triphosphate reductase class III catalytic subunit.
  
 0.673
SEK66228.1
2,4-dienoyl-CoA reductase.
  
 0.661
SEL00316.1
2,4-dienoyl-CoA reductase.
  
 0.661
SEL03819.1
2-enoate reductase.
  
 0.661
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.567
SEK67851.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6).
       0.508
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 
 0.502
SEK67795.1
Glycogen debranching enzyme, putative.
  
    0.484
SEK64976.1
NAD+ synthase (glutamine-hydrolysing).
     
 0.481
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
   
  
 0.469
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.