STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK81545.1Hypothetical protein. (380 aa)    
Predicted Functional Partners:
SEK95729.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
  0.849
SEK81574.1
Hypothetical protein.
       0.574
SEK81453.1
Glutamine synthetase.
    
  0.572
pyrK
Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
  
  0.547
SEK35732.1
ferredoxin--NADP+ reductase.
  
  0.547
SEK81525.1
Putative MFS transporter, AGZA family, xanthine/uracil permease.
       0.479
SEK81143.1
Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 
  0.450
SEK60660.1
Regulator of sigma E protease.
      
 0.434
SEK81476.1
Response regulator receiver and ANTAR domain protein.
       0.416
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
       0.416
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.