STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK82820.1Hypothetical protein. (412 aa)    
Predicted Functional Partners:
SEK59892.1
Flagellar motor switch protein FliN/FliY.
    
   0.825
SEK76326.1
Flagellar motor switch protein FliN/FliY.
    
   0.825
SEK82793.1
Glycosyltransferase involved in cell wall bisynthesis.
    
  0.815
SEK45932.1
Mannose-1-phosphate guanylyltransferase.
  
  
 0.626
SEK44243.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.596
SEK45873.1
GDP-L-fucose synthase.
 
 
  0.552
SEK82847.1
Hypothetical protein.
       0.524
SEK47062.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
  
 
 0.523
SEK47446.1
UDP-glucose 4-epimerase.
  
 
 0.523
SEK47371.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
 
 0.490
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.