STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK86921.1Thioredoxin reductase. (421 aa)    
Predicted Functional Partners:
SEK86900.1
CxxC motif-containing protein.
    0.998
SEK86952.1
Glycerol-3-phosphate dehydrogenase.
 
 0.997
trxA
Thioredoxin; Belongs to the thioredoxin family.
  
 0.912
SEK81199.1
Thioredoxin 1.
  
 0.912
SEK86994.1
Glycerol uptake operon antiterminator.
 
    0.849
SEK86609.1
L-threonine aldolase.
    
  0.815
SEK96139.1
NADPH-dependent glutamate synthase beta chain.
  
 
 0.811
SEK66228.1
2,4-dienoyl-CoA reductase.
  
 0.800
SEL00316.1
2,4-dienoyl-CoA reductase.
  
 0.800
SEL03819.1
2-enoate reductase.
  
 0.800
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.