STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK92253.1Multiple sugar transport system substrate-binding protein. (400 aa)    
Predicted Functional Partners:
SEK92318.1
Multiple sugar transport system permease protein.
  0.939
SEK92337.1
Multiple sugar transport system permease protein.
 
  0.929
SEK40972.1
Multiple sugar transport system permease protein.
  
  0.864
SEK92240.1
Two-component system, response regulator YesN.
 
     0.857
SEK40948.1
Multiple sugar transport system permease protein.
 
  0.850
SEK92204.1
Two-component system, sensor histidine kinase YesM.
 
     0.828
SEL01600.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.806
SEK95239.1
Arabinosaccharide transport system permease protein.
  
  0.797
SEK81065.1
Multiple sugar transport system permease protein.
 
  0.774
SEK95211.1
Arabinosaccharide transport system permease protein.
  
  0.770
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.