STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK92337.1Multiple sugar transport system permease protein. (277 aa)    
Predicted Functional Partners:
SEL01600.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.969
SEK92291.1
Multiple sugar transport system substrate-binding protein.
 
  0.955
SEK92318.1
Multiple sugar transport system permease protein.
 
0.946
SEK92253.1
Multiple sugar transport system substrate-binding protein.
 
  0.929
SEK81065.1
Multiple sugar transport system permease protein.
  0.919
SEK54173.1
Raffinose/stachyose/melibiose transport system permease protein.
  0.914
SEK40948.1
Multiple sugar transport system permease protein.
  0.912
SEL07405.1
Fructooligosaccharide transport system permease protein.
  0.911
SEK95239.1
Arabinosaccharide transport system permease protein.
 
  0.909
SEK77559.1
lactose/L-arabinose transport system permease protein.
  0.890
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.