STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK92836.1Glycosyl hydrolases family 2. (807 aa)    
Predicted Functional Partners:
SEK53444.1
Glycosyl hydrolases family 35.
 
 
 0.950
SEK77759.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.932
SEL05472.1
Beta-galactosidase.
   
 0.917
SEK77805.1
Glucokinase.
     
 0.902
SEK35586.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
  
0.833
SEK77623.1
Beta-galactosidase.
  
  
0.831
SEK55559.1
alpha-L-rhamnosidase.
 0.812
SEK92870.1
Na+/melibiose symporter.
 
  
 0.804
SEK93133.1
alpha-L-rhamnosidase.
 0.788
SEK35481.1
Alpha-galactosidase.
  
 
 0.767
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.