STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK95191.1alpha-N-arabinofuranosidase. (506 aa)    
Predicted Functional Partners:
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.937
SEK21377.1
Alpha-L-arabinofuranosidase B (ABFB) domain-containing protein.
 
 
 0.905
SEK55616.1
L-arabinose isomerase.
  
 
 0.839
SEK55059.1
alpha-N-arabinofuranosidase.
 
 
 0.828
SEK95343.1
Arabinan endo-1,5-alpha-L-arabinosidase.
 
 
 0.824
SEK54126.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
 
 
 0.750
SEK93105.1
Glycosyl hydrolases family 43.
 
 
 0.750
SEK95323.1
Beta-xylosidase, GH43 family.
 
   
 0.726
SEK95239.1
Arabinosaccharide transport system permease protein.
  
    0.713
SEK95211.1
Arabinosaccharide transport system permease protein.
  
    0.709
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.