STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK95430.1Flagellin. (490 aa)    
Predicted Functional Partners:
SEK59892.1
Flagellar motor switch protein FliN/FliY.
 
 
 0.928
SEK59533.1
Flagellar motor switch protein FliG.
 
  
 0.910
fliS
Flagellar protein FliS.
 
 
 0.905
fliI
Flagellum-specific ATP synthase.
 
 
 0.899
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
 
  
 0.898
SEK59864.1
Flagellar motor switch protein FliM.
 
  
 0.897
SEK59732.1
Flagellar hook protein FlgE.
 
  
 0.894
SEK59760.1
Chemotaxis protein MotA.
 
  
 0.894
SEK71164.1
Flagellar basal-body rod protein FlgG.
 
 
 0.887
SEK71188.1
Flagellar basal-body rod protein FlgG.
 
 
 0.886
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.