STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEK96229.1Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB. (516 aa)    
Predicted Functional Partners:
SEK96249.1
Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB.
   
 0.997
SEK96207.1
CoA-substrate-specific enzyme activase, putative.
  
 0.980
SEK81428.1
CoA-substrate-specific enzyme activase, putative.
  
 0.850
SEK53067.1
butyryl-CoA dehydrogenase.
    
 0.807
SEK96277.1
CO dehydrogenase maturation factor.
       0.569
SEK96139.1
NADPH-dependent glutamate synthase beta chain.
    
  0.554
SEK96155.1
CO dehydrogenase/acetyl-CoA synthase complex beta subunit.
       0.552
SEK96182.1
Hypothetical protein.
       0.492
Your Current Organism:
Pseudobutyrivibrio ruminis
NCBI taxonomy Id: 46206
Other names: DSM 9787, P. ruminis, strain A12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.