Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFI82284.1 | SFI82324.1 | SAMN05421852_102130 | SAMN05421852_102131 | Isocitrate dehydrogenase. | Citrate synthase; Belongs to the citrate synthase family. | 0.944 |
SFI82284.1 | SFI82359.1 | SAMN05421852_102130 | SAMN05421852_102132 | Isocitrate dehydrogenase. | Sporulation integral membrane protein YtvI. | 0.402 |
SFI82324.1 | SFI82284.1 | SAMN05421852_102131 | SAMN05421852_102130 | Citrate synthase; Belongs to the citrate synthase family. | Isocitrate dehydrogenase. | 0.944 |
SFI82324.1 | SFI82359.1 | SAMN05421852_102131 | SAMN05421852_102132 | Citrate synthase; Belongs to the citrate synthase family. | Sporulation integral membrane protein YtvI. | 0.504 |
SFI82359.1 | SFI82284.1 | SAMN05421852_102132 | SAMN05421852_102130 | Sporulation integral membrane protein YtvI. | Isocitrate dehydrogenase. | 0.402 |
SFI82359.1 | SFI82324.1 | SAMN05421852_102132 | SAMN05421852_102131 | Sporulation integral membrane protein YtvI. | Citrate synthase; Belongs to the citrate synthase family. | 0.504 |
SFI82359.1 | SFJ10017.1 | SAMN05421852_102132 | SAMN05421852_104189 | Sporulation integral membrane protein YtvI. | Competence protein ComEC. | 0.576 |
SFI82359.1 | SFJ61290.1 | SAMN05421852_102132 | SAMN05421852_11416 | Sporulation integral membrane protein YtvI. | Sporulation integral membrane protein YlbJ. | 0.462 |
SFI82359.1 | purE | SAMN05421852_102132 | SAMN05421852_1109 | Sporulation integral membrane protein YtvI. | 5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.405 |
SFJ10017.1 | SFI82359.1 | SAMN05421852_104189 | SAMN05421852_102132 | Competence protein ComEC. | Sporulation integral membrane protein YtvI. | 0.576 |
SFJ61290.1 | SFI82359.1 | SAMN05421852_11416 | SAMN05421852_102132 | Sporulation integral membrane protein YlbJ. | Sporulation integral membrane protein YtvI. | 0.462 |
purE | SFI82359.1 | SAMN05421852_1109 | SAMN05421852_102132 | 5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | Sporulation integral membrane protein YtvI. | 0.405 |