STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI83019.1Glutathione synthase/RimK-type ligase, ATP-grasp superfamily. (477 aa)    
Predicted Functional Partners:
SFI83087.1
YheC/D like ATP-grasp.
 
    
0.878
SFI83056.1
YheC/D like ATP-grasp.
 
    
0.861
SFI83115.1
YheC/D like ATP-grasp.
 
    
0.853
SFI83139.1
Acetyltransferase (GNAT) family protein.
       0.818
SFJ50339.1
Phage phiEco32-like COOH.NH2 ligase-type 2.
     0.770
SFJ58777.1
Hypothetical protein.
  
     0.762
SFJ41020.1
Putative membrane protein, TIGR04086 family.
  
     0.748
SFJ32534.1
Protein YqhG of unknown function.
  
     0.723
SFJ35522.1
Protein of unknown function.
  
     0.722
SFI63093.1
HTH domain-containing protein.
  
     0.720
Your Current Organism:
Thermoflavimicrobium dichotomicum
NCBI taxonomy Id: 46223
Other names: ATCC 49854, Actinobifida dichotomica, DSM 44778, JCM 9688, KCTC 3667, T. dichotomicum, Thermoactinomyces dichotomica, Thermoactinomyces dichotomicus, Thermomonospora citrina, strain 114
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