Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ16489.1 | SFJ59664.1 | SAMN05421852_10589 | SAMN05421852_113100 | 2-deoxy-D-gluconate 3-dehydrogenase. | Polyketide synthase PksJ. | 0.914 |
SFJ16489.1 | SFJ64597.1 | SAMN05421852_10589 | SAMN05421852_11523 | 2-deoxy-D-gluconate 3-dehydrogenase. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.847 |
SFJ16489.1 | SFJ91317.1 | SAMN05421852_10589 | SAMN05421852_1371 | 2-deoxy-D-gluconate 3-dehydrogenase. | Surfactin family lipopeptide synthetase A. | 0.858 |
SFJ16489.1 | SFJ91368.1 | SAMN05421852_10589 | SAMN05421852_1372 | 2-deoxy-D-gluconate 3-dehydrogenase. | Surfactin family lipopeptide synthetase A. | 0.842 |
SFJ16489.1 | SFJ94176.1 | SAMN05421852_10589 | SAMN05421852_1491 | 2-deoxy-D-gluconate 3-dehydrogenase. | Surfactin family lipopeptide synthetase A. | 0.858 |
SFJ16489.1 | SFJ95149.1 | SAMN05421852_10589 | SAMN05421852_1552 | 2-deoxy-D-gluconate 3-dehydrogenase. | Surfactin family lipopeptide synthetase A/fengycin family lipopeptide synthetase D. | 0.858 |
SFJ16489.1 | SFJ95232.1 | SAMN05421852_10589 | SAMN05421852_1561 | 2-deoxy-D-gluconate 3-dehydrogenase. | Fengycin family lipopeptide synthetase D. | 0.842 |
SFJ16489.1 | SFJ96200.1 | SAMN05421852_10589 | SAMN05421852_1641 | 2-deoxy-D-gluconate 3-dehydrogenase. | Polyketide synthase PksM/polyketide synthase PksN. | 0.920 |
SFJ16489.1 | SFJ97123.1 | SAMN05421852_10589 | SAMN05421852_1731 | 2-deoxy-D-gluconate 3-dehydrogenase. | Amino acid adenylation domain-containing protein. | 0.842 |
SFJ16489.1 | SFJ97465.1 | SAMN05421852_10589 | SAMN05421852_1771 | 2-deoxy-D-gluconate 3-dehydrogenase. | Lichenysin synthetase A. | 0.858 |
SFJ59664.1 | SFJ16489.1 | SAMN05421852_113100 | SAMN05421852_10589 | Polyketide synthase PksJ. | 2-deoxy-D-gluconate 3-dehydrogenase. | 0.914 |
SFJ59664.1 | SFJ64597.1 | SAMN05421852_113100 | SAMN05421852_11523 | Polyketide synthase PksJ. | Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein. | 0.999 |
SFJ59664.1 | SFJ91317.1 | SAMN05421852_113100 | SAMN05421852_1371 | Polyketide synthase PksJ. | Surfactin family lipopeptide synthetase A. | 0.999 |
SFJ59664.1 | SFJ91368.1 | SAMN05421852_113100 | SAMN05421852_1372 | Polyketide synthase PksJ. | Surfactin family lipopeptide synthetase A. | 0.999 |
SFJ59664.1 | SFJ94176.1 | SAMN05421852_113100 | SAMN05421852_1491 | Polyketide synthase PksJ. | Surfactin family lipopeptide synthetase A. | 0.999 |
SFJ59664.1 | SFJ95149.1 | SAMN05421852_113100 | SAMN05421852_1552 | Polyketide synthase PksJ. | Surfactin family lipopeptide synthetase A/fengycin family lipopeptide synthetase D. | 0.999 |
SFJ59664.1 | SFJ95232.1 | SAMN05421852_113100 | SAMN05421852_1561 | Polyketide synthase PksJ. | Fengycin family lipopeptide synthetase D. | 0.999 |
SFJ59664.1 | SFJ96200.1 | SAMN05421852_113100 | SAMN05421852_1641 | Polyketide synthase PksJ. | Polyketide synthase PksM/polyketide synthase PksN. | 0.999 |
SFJ59664.1 | SFJ97123.1 | SAMN05421852_113100 | SAMN05421852_1731 | Polyketide synthase PksJ. | Amino acid adenylation domain-containing protein. | 0.999 |
SFJ59664.1 | SFJ97465.1 | SAMN05421852_113100 | SAMN05421852_1771 | Polyketide synthase PksJ. | Lichenysin synthetase A. | 0.999 |
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