STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ24305.1DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. (769 aa)    
Predicted Functional Partners:
SFJ68825.1
Hypothetical protein.
   
 
 0.976
SFJ04484.1
POTRA domain-containing protein, FtsQ-type; Essential cell division protein.
   
 
 0.868
SFI70207.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
  
  
 0.790
SFI70335.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
  
  
 0.767
SFI70243.1
Chromosome partitioning protein.
  
  
 0.732
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
  
 0.711
SFJ04806.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein)/penicillin-binding protein 2B.
 
 
 0.710
SFJ10017.1
Competence protein ComEC.
 
  
 0.674
SFJ24230.1
ATP-dependent protease ClpP, protease subunit.
  
  
 0.667
dnaA
Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
  
  
 0.642
Your Current Organism:
Thermoflavimicrobium dichotomicum
NCBI taxonomy Id: 46223
Other names: ATCC 49854, Actinobifida dichotomica, DSM 44778, JCM 9688, KCTC 3667, T. dichotomicum, Thermoactinomyces dichotomica, Thermoactinomyces dichotomicus, Thermomonospora citrina, strain 114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.