STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFJ55006.1Long-chain acyl-CoA synthetase. (524 aa)    
Predicted Functional Partners:
SFJ96200.1
Polyketide synthase PksM/polyketide synthase PksN.
 
 0.992
SFJ59664.1
Polyketide synthase PksJ.
 
0.986
SFJ97465.1
Lichenysin synthetase A.
0.967
SFJ64597.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
0.963
SFJ94176.1
Surfactin family lipopeptide synthetase A.
 
 0.963
SFJ91317.1
Surfactin family lipopeptide synthetase A.
 
 0.962
SFJ95149.1
Surfactin family lipopeptide synthetase A/fengycin family lipopeptide synthetase D.
 
 0.961
SFJ97123.1
Amino acid adenylation domain-containing protein.
0.911
SFJ92820.1
Polyketide synthase PksN/rhizoxin biosynthesis, polyketide synthase RhiE.
 
 0.905
SFJ97369.1
Fengycin family lipopeptide synthetase D.
 
 0.899
Your Current Organism:
Thermoflavimicrobium dichotomicum
NCBI taxonomy Id: 46223
Other names: ATCC 49854, Actinobifida dichotomica, DSM 44778, JCM 9688, KCTC 3667, T. dichotomicum, Thermoactinomyces dichotomica, Thermoactinomyces dichotomicus, Thermomonospora citrina, strain 114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.